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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11992267 chr8:24922539 C/T R3HCC1 chr8:23127633-23153792:+ -0.64 -7.16 4.27E-12 Box Plot
BLCA rs11992267 chr8:24922539 C/T SLC39A14 chr8:22224762-22291642:+ -0.43 -6.5 2.47E-10 Box Plot
BLCA rs11992267 chr8:24922539 C/T TNKS chr8:9413424-9639856:+ -0.53 -6.49 2.63E-10 Box Plot
BLCA rs11992267 chr8:24922539 C/T VPS37A chr8:17104080-17159936:+ -0.6 -6.2 1.47E-9 Box Plot
BLCA rs11992267 chr8:24922539 C/T XPO7 chr8:21777182-21864096:+ -0.7 -7.13 4.96E-12 Box Plot
BLCA rs11992967 chr8:15154831 A/T KIAA1967 chr8:22462257-22477981:+ 0.79 6.28 9.13E-10 Box Plot
BLCA rs11992967 chr8:15154831 A/T XPO7 chr8:21777182-21864096:+ 0.81 6.51 2.35E-10 Box Plot
BLCA rs11993600 chr8:6600829 A/G CNOT7 chr8:17082473-17104387:- 0.81 6.48 2.83E-10 Box Plot
BLCA rs11997145 chr8:27886297 C/G CDCA2 chr8:25316513-25365436:+ -0.46 -6.11 2.45E-9 Box Plot
BLCA rs11997145 chr8:27886297 C/G CHMP7 chr8:23101150-23119513:+ -0.7 -6.91 1.98E-11 Box Plot
BLCA rs11997145 chr8:27886297 C/G CNOT7 chr8:17082473-17104387:- -0.66 -6.16 1.88E-9 Box Plot
BLCA rs11997145 chr8:27886297 C/G DCTN6 chr8:30013813-30041156:+ -0.74 -6.98 1.3E-11 Box Plot
BLCA rs11997145 chr8:27886297 C/G ENTPD4 chr8:23243296-23315208:- -0.55 -6.06 3.34E-9 Box Plot
BLCA rs11997145 chr8:27886297 C/G GTF2E2 chr8:30435835-30515768:- -0.71 -6.71 6.89E-11 Box Plot
BLCA rs11997145 chr8:27886297 C/G KCTD9 chr8:25285363-25315992:- -0.57 -6.72 6.81E-11 Box Plot